2014
|
| Guio, L; Barron, M G; Gonzalez, J The transposable element Bari-Jheh mediates oxidative stress response in Drosophila Journal Article In: Mol Ecol, vol. 23, no. 8, pp. 2020-30, 2014. @article{RN25,
title = {The transposable element Bari-Jheh mediates oxidative stress response in Drosophila},
author = {L Guio and M G Barron and J Gonzalez},
url = {https://www.ncbi.nlm.nih.gov/pubmed/24629106},
doi = {10.1111/mec.12711},
year = {2014},
date = {2014-01-01},
journal = {Mol Ecol},
volume = {23},
number = {8},
pages = {2020-30},
keywords = {},
pubstate = {published},
tppubtype = {article}
}
|
 | Mateo, L; Gonzalez, J Pogo-like transposases have been repeatedly domesticated into CENP-B-related proteins Journal Article In: Genome Biol Evol, vol. 6, no. 8, pp. 2008-16, 2014. @article{RN30,
title = {Pogo-like transposases have been repeatedly domesticated into CENP-B-related proteins},
author = {L Mateo and J Gonzalez},
url = {https://www.ncbi.nlm.nih.gov/pubmed/25062917
http://portal.prbb.org/informacion/ibe-csic-upf-pogo-like-transposases-have-been-repeatedly-domesticated-into-cenp-b-related-proteins/748},
doi = {10.1093/gbe/evu153},
year = {2014},
date = {2014-01-01},
journal = {Genome Biol Evol},
volume = {6},
number = {8},
pages = {2008-16},
keywords = {},
pubstate = {published},
tppubtype = {article}
}
|
 | Mateo, L; Ullastres, A; Gonzalez, J A transposable element insertion confers xenobiotic resistance in Drosophila Journal Article In: PLoS Genet, vol. 10, no. 8, pp. e1004560, 2014. @article{RN29,
title = {A transposable element insertion confers xenobiotic resistance in Drosophila},
author = {L Mateo and A Ullastres and J Gonzalez},
url = {https://www.ncbi.nlm.nih.gov/pubmed/25122208
http://portal.prbb.org/informacion/ibe-csic-upf-discovered-how-a-transposable-element-insertion-confers-xenobiotic-resistance-in-drosophila/747},
doi = {10.1371/journal.pgen.1004560},
year = {2014},
date = {2014-01-01},
journal = {PLoS Genet},
volume = {10},
number = {8},
pages = {e1004560},
keywords = {},
pubstate = {published},
tppubtype = {article}
}
|
2013
|
| Casacuberta, E; Gonzalez, J The impact of transposable elements in environmental adaptation Journal Article In: Mol Ecol, vol. 22, no. 6, pp. 1503-17, 2013. @article{RN7,
title = {The impact of transposable elements in environmental adaptation},
author = {E Casacuberta and J Gonzalez},
url = {https://www.ncbi.nlm.nih.gov/pubmed/23293987},
doi = {10.1111/mec.12170},
year = {2013},
date = {2013-01-01},
journal = {Mol Ecol},
volume = {22},
number = {6},
pages = {1503-17},
keywords = {},
pubstate = {published},
tppubtype = {article}
}
|
2012
|
| Calvete, O; Gonzalez, J; Betran, E; Ruiz, A Segmental duplication, microinversion, and gene loss associated with a complex inversion breakpoint region in Drosophila Journal Article In: Mol Biol Evol, vol. 29, no. 7, pp. 1875-89, 2012. @article{RN5,
title = {Segmental duplication, microinversion, and gene loss associated with a complex inversion breakpoint region in Drosophila},
author = {O Calvete and J Gonzalez and E Betran and A Ruiz},
url = {https://www.ncbi.nlm.nih.gov/pubmed/22328714},
doi = {10.1093/molbev/mss067},
year = {2012},
date = {2012-01-01},
journal = {Mol Biol Evol},
volume = {29},
number = {7},
pages = {1875-89},
keywords = {},
pubstate = {published},
tppubtype = {article}
}
|
| González, J; Petrov, D A Evolution of Genome Content: Population Dynamics of Transposable Elements in Flies and Humans Book Chapter In: Methods in Molecular Biology, 2012. @inbook{RN42,
title = {Evolution of Genome Content: Population Dynamics of Transposable Elements in Flies and Humans},
author = {J González and D A Petrov },
url = {https://www.ncbi.nlm.nih.gov/pubmed/22407716},
doi = {10.1007/978-1-61779-582-4_13},
year = {2012},
date = {2012-01-01},
booktitle = {Methods in Molecular Biology},
keywords = {},
pubstate = {published},
tppubtype = {inbook}
}
|
 | Zhu, Y; Bergland, A O; Gonzalez, J; Petrov, D A Empirical validation of pooled whole genome population re-sequencing in Drosophila melanogaster Journal Article In: PLoS One, vol. 7, no. 7, pp. e41901, 2012. @article{RN38,
title = {Empirical validation of pooled whole genome population re-sequencing in Drosophila melanogaster},
author = {Y Zhu and A O Bergland and J Gonzalez and D A Petrov},
url = {https://www.ncbi.nlm.nih.gov/pubmed/22848651},
doi = {10.1371/journal.pone.0041901},
year = {2012},
date = {2012-01-01},
journal = {PLoS One},
volume = {7},
number = {7},
pages = {e41901},
keywords = {},
pubstate = {published},
tppubtype = {article}
}
|
2011
|
| Fiston-Lavier, A S; Carrigan, M; Petrov, D A; Gonzalez, J T-lex: a program for fast and accurate assessment of transposable element presence using next-generation sequencing data Journal Article In: Nucleic Acids Res, vol. 39, no. 6, pp. e36, 2011. @article{RN11,
title = {T-lex: a program for fast and accurate assessment of transposable element presence using next-generation sequencing data},
author = {A S Fiston-Lavier and M Carrigan and D A Petrov and J Gonzalez},
url = {https://www.ncbi.nlm.nih.gov/pubmed/21177644},
doi = {10.1093/nar/gkq1291},
year = {2011},
date = {2011-01-01},
journal = {Nucleic Acids Res},
volume = {39},
number = {6},
pages = {e36},
keywords = {},
pubstate = {published},
tppubtype = {article}
}
|
| Petrov, D A; Fiston-Lavier, A S; Lipatov, M; Lenkov, K; Gonzalez, J Population genomics of transposable elements in Drosophila melanogaster Journal Article In: Mol Biol Evol, vol. 28, no. 5, pp. 1633-44, 2011. @article{RN32,
title = {Population genomics of transposable elements in Drosophila melanogaster},
author = {D A Petrov and A S Fiston-Lavier and M Lipatov and K Lenkov and J Gonzalez},
url = {https://www.ncbi.nlm.nih.gov/pubmed/21172826},
doi = {10.1093/molbev/msq337},
year = {2011},
date = {2011-01-01},
journal = {Mol Biol Evol},
volume = {28},
number = {5},
pages = {1633-44},
keywords = {},
pubstate = {published},
tppubtype = {article}
}
|
2010
|
 | Gonzalez, J; Karasov, T L; Messer, P W; Petrov, D A Genome-wide patterns of adaptation to temperate environments associated with transposable elements in Drosophila Journal Article In: PLoS Genet, vol. 6, no. 4, pp. e1000905, 2010. @article{RN17,
title = {Genome-wide patterns of adaptation to temperate environments associated with transposable elements in Drosophila},
author = {J Gonzalez and T L Karasov and P W Messer and D A Petrov},
url = {https://www.ncbi.nlm.nih.gov/pubmed/20386746
https://f1000.com/prime/3346960#recommendations},
doi = {10.1371/journal.pgen.1000905},
year = {2010},
date = {2010-01-01},
journal = {PLoS Genet},
volume = {6},
number = {4},
pages = {e1000905},
keywords = {},
pubstate = {published},
tppubtype = {article}
}
|
2009
|
| Gonzalez, J; Macpherson, J M; Messer, P W; Petrov, D A Inferring the strength of selection in Drosophila under complex demographic models Journal Article In: Mol Biol Evol, vol. 26, no. 3, pp. 513-26, 2009. @article{RN21,
title = {Inferring the strength of selection in Drosophila under complex demographic models},
author = {J Gonzalez and J M Macpherson and P W Messer and D A Petrov},
url = {https://www.ncbi.nlm.nih.gov/pubmed/19033258},
doi = {10.1093/molbev/msn270},
year = {2009},
date = {2009-01-01},
journal = {Mol Biol Evol},
volume = {26},
number = {3},
pages = {513-26},
keywords = {},
pubstate = {published},
tppubtype = {article}
}
|
| Gonzalez, J; Macpherson, J M; Petrov, D A A recent adaptive transposable element insertion near highly conserved developmental loci in Drosophila melanogaster Journal Article In: Mol Biol Evol, vol. 26, no. 9, pp. 1949-61, 2009. @article{RN20,
title = {A recent adaptive transposable element insertion near highly conserved developmental loci in Drosophila melanogaster},
author = {J Gonzalez and J M Macpherson and D A Petrov},
url = {https://www.ncbi.nlm.nih.gov/pubmed/19458110},
doi = {10.1093/molbev/msp107},
year = {2009},
date = {2009-01-01},
journal = {Mol Biol Evol},
volume = {26},
number = {9},
pages = {1949-61},
keywords = {},
pubstate = {published},
tppubtype = {article}
}
|
| Barker, J S; Frydenberg, J; Gonzalez, J; Davies, H I; Ruiz, A; Sorensen, J G; Loeschcke, V Bottlenecks, population differentiation and apparent selection at microsatellite loci in Australian Drosophila buzzatii Journal Article In: Heredity, vol. 102, no. 4, pp. 389-401, 2009. @article{RN2,
title = {Bottlenecks, population differentiation and apparent selection at microsatellite loci in Australian Drosophila buzzatii},
author = {J S Barker and J Frydenberg and J Gonzalez and H I Davies and A Ruiz and J G Sorensen and V Loeschcke},
url = {https://www.ncbi.nlm.nih.gov/pubmed/19142202},
doi = {10.1038/hdy.2008.127},
year = {2009},
date = {2009-01-01},
journal = {Heredity},
volume = {102},
number = {4},
pages = {389-401},
keywords = {},
pubstate = {published},
tppubtype = {article}
}
|
| Gonzalez, J; Petrov, D A The adaptive role of transposable elements in the Drosophila genome Journal Article In: Gene, vol. 448, no. 2, pp. 124-33, 2009. @article{RN13,
title = {The adaptive role of transposable elements in the Drosophila genome},
author = {J Gonzalez and D A Petrov},
url = {https://www.ncbi.nlm.nih.gov/pubmed/19555747},
doi = {10.1016/j.gene.2009.06.008},
year = {2009},
date = {2009-01-01},
journal = {Gene},
volume = {448},
number = {2},
pages = {124-33},
keywords = {},
pubstate = {published},
tppubtype = {article}
}
|
| Gonzalez, J; Petrov, D A MITEs—The Ultimate Parasites Journal Article In: Science, vol. 325 (5946), pp. 1352-3, 2009. @article{RN14,
title = {MITEs—The Ultimate Parasites},
author = {J Gonzalez and D A Petrov},
url = {https://www.ncbi.nlm.nih.gov/pubmed/19745141},
doi = {10.1126/science.1179556},
year = {2009},
date = {2009-01-01},
journal = {Science},
volume = {325 (5946)},
pages = {1352-3},
keywords = {},
pubstate = {published},
tppubtype = {article}
}
|
| da Costa, O Prazeres; Gonzalez, J; Ruiz, A Cloning and sequencing of the breakpoint regions of inversion 5g fixed in Drosophila buzzatii Journal Article In: Chromosoma, vol. 118, no. 3, pp. 349-60, 2009. @article{RN33,
title = {Cloning and sequencing of the breakpoint regions of inversion 5g fixed in Drosophila buzzatii},
author = {O Prazeres da Costa and J Gonzalez and A Ruiz},
url = {https://www.ncbi.nlm.nih.gov/pubmed/19198866
http://www.uab.cat/servlet/Satellite?cid=1096481464166&pagename=UABDivulga/Page/TemplatePageDetallArticleInvestigar¶m1=1259046573545},
doi = {10.1007/s00412-008-0201-5},
year = {2009},
date = {2009-01-01},
journal = {Chromosoma},
volume = {118},
number = {3},
pages = {349-60},
keywords = {},
pubstate = {published},
tppubtype = {article}
}
|
2008
|
 | Gonzalez, J; Lenkov, K; Lipatov, M; Macpherson, J M; Petrov, D A High rate of recent transposable element-induced adaptation in Drosophila melanogaster Journal Article In: PLoS Biol, vol. 6, no. 10, pp. e251, 2008. @article{RN19,
title = {High rate of recent transposable element-induced adaptation in Drosophila melanogaster},
author = {J Gonzalez and K Lenkov and M Lipatov and J M Macpherson and D A Petrov},
url = {https://www.ncbi.nlm.nih.gov/pubmed/18942889
https://f1000.com/prime/1142010#recommendations},
doi = {10.1371/journal.pbio.0060251},
year = {2008},
date = {2008-01-01},
journal = {PLoS Biol},
volume = {6},
number = {10},
pages = {e251},
keywords = {},
pubstate = {published},
tppubtype = {article}
}
|
| Macpherson, J M; Gonzalez, J; Witten, D M; Davis, J C; Rosenberg, N A; Hirsh, A E; Petrov, D A Nonadaptive explanations for signatures of partial selective sweeps in Drosophila Journal Article In: Mol Biol Evol, vol. 25, no. 6, pp. 1025-42, 2008. @article{RN28,
title = {Nonadaptive explanations for signatures of partial selective sweeps in Drosophila},
author = {J M Macpherson and J Gonzalez and D M Witten and J C Davis and N A Rosenberg and A E Hirsh and D A Petrov},
url = {https://www.ncbi.nlm.nih.gov/pubmed/18199829},
doi = {10.1093/molbev/msn007},
year = {2008},
date = {2008-01-01},
journal = {Mol Biol Evol},
volume = {25},
number = {6},
pages = {1025-42},
keywords = {},
pubstate = {published},
tppubtype = {article}
}
|
2007
|
| Gonzalez, J; Casals, F; Ruiz, A Testing chromosomal phylogenies and inversion breakpoint reuse in Drosophila Journal Article In: Genetics, vol. 175, no. 1, pp. 167-77, 2007. @article{RN16,
title = {Testing chromosomal phylogenies and inversion breakpoint reuse in Drosophila},
author = {J Gonzalez and F Casals and A Ruiz},
url = {https://www.ncbi.nlm.nih.gov/pubmed/17028333},
doi = {10.1534/genetics.106.062612},
year = {2007},
date = {2007-01-01},
journal = {Genetics},
volume = {175},
number = {1},
pages = {167-77},
keywords = {},
pubstate = {published},
tppubtype = {article}
}
|
2006
|
| Casals, F; Gonzalez, J; Ruiz, A Abundance and chromosomal distribution of six Drosophila buzzatii transposons: BuT1, BuT2, BuT3, BuT4, BuT5, and BuT6 Journal Article In: Chromosoma, vol. 115, no. 5, pp. 403-12, 2006. @article{RN9,
title = {Abundance and chromosomal distribution of six Drosophila buzzatii transposons: BuT1, BuT2, BuT3, BuT4, BuT5, and BuT6},
author = {F Casals and J Gonzalez and A Ruiz},
url = {https://www.ncbi.nlm.nih.gov/pubmed/16773395},
doi = {10.1007/s00412-006-0071-7},
year = {2006},
date = {2006-01-01},
journal = {Chromosoma},
volume = {115},
number = {5},
pages = {403-12},
keywords = {},
pubstate = {published},
tppubtype = {article}
}
|
2005
|
| Gonzalez, J; Nefedov, M; Bosdet, I; Casals, F; Calvete, O; Delprat, A; Shin, H; Chiu, R; Mathewson, C; Wye, N; Hoskins, R A; Schein, J E; de Jong, P; Ruiz, A A BAC-based physical map of the Drosophila buzzatii genome Journal Article In: Genome Res, vol. 15, no. 6, pp. 885-92, 2005. @article{RN22,
title = {A BAC-based physical map of the Drosophila buzzatii genome},
author = {J Gonzalez and M Nefedov and I Bosdet and F Casals and O Calvete and A Delprat and H Shin and R Chiu and C Mathewson and N Wye and R A Hoskins and J E Schein and P de Jong and A Ruiz},
url = {https://www.ncbi.nlm.nih.gov/pubmed/15930498},
doi = {10.1101/gr.3263105},
year = {2005},
date = {2005-01-01},
journal = {Genome Res},
volume = {15},
number = {6},
pages = {885-92},
keywords = {},
pubstate = {published},
tppubtype = {article}
}
|
| Casals, F; Caceres, M; Manfrin, M H; Gonzalez, J; Ruiz, A Molecular characterization and chromosomal distribution of Galileo, Kepler and Newton, three foldback transposable elements of the Drosophila buzzatii species complex Journal Article In: Genetics, vol. 169, no. 4, pp. 2047-59, 2005. @article{RN8,
title = {Molecular characterization and chromosomal distribution of Galileo, Kepler and Newton, three foldback transposable elements of the Drosophila buzzatii species complex},
author = {F Casals and M Caceres and M H Manfrin and J Gonzalez and A Ruiz},
url = {https://www.ncbi.nlm.nih.gov/pubmed/15695364},
doi = {10.1534/genetics.104.035048},
year = {2005},
date = {2005-01-01},
journal = {Genetics},
volume = {169},
number = {4},
pages = {2047-59},
keywords = {},
pubstate = {published},
tppubtype = {article}
}
|
2004
|
| Gonzalez, J; Casals, F; Ruiz, A Duplicative and conservative transpositions of larval serum protein 1 genes in the genus Drosophila Journal Article In: Genetics, vol. 168, no. 1, pp. 253-64, 2004. @article{RN15,
title = {Duplicative and conservative transpositions of larval serum protein 1 genes in the genus Drosophila},
author = {J Gonzalez and F Casals and A Ruiz},
url = {https://www.ncbi.nlm.nih.gov/pubmed/15454541},
doi = {10.1534/genetics.103.025916},
year = {2004},
date = {2004-01-01},
journal = {Genetics},
volume = {168},
number = {1},
pages = {253-64},
keywords = {},
pubstate = {published},
tppubtype = {article}
}
|
2003
|
| Ranz, J M; Gonzalez, J; Casals, F; Ruiz, A Low occurrence of gene transposition events during the evolution of the genus Drosophila Journal Article In: Evolution, vol. 57, no. 6, pp. 1325-1335, 2003. @article{RN39,
title = {Low occurrence of gene transposition events during the evolution of the genus Drosophila},
author = {J M Ranz and J Gonzalez and F Casals and A Ruiz},
url = {https://www.ncbi.nlm.nih.gov/pubmed/12894940},
year = {2003},
date = {2003-01-01},
journal = {Evolution},
volume = {57},
number = {6},
pages = {1325-1335},
keywords = {},
pubstate = {published},
tppubtype = {article}
}
|
2002
|
| González, J; Ranz, J M; Ruiz, A Chromosomal Elements Evolve at Different Rates in the Drosophila Genome Journal Article In: Genetics Society of America, vol. 161, no. 3, 2002. @article{RN23,
title = {Chromosomal Elements Evolve at Different Rates in the Drosophila Genome},
author = {J González and J M Ranz and A Ruiz},
url = {https://www.ncbi.nlm.nih.gov/pubmed/12136017},
year = {2002},
date = {2002-01-01},
journal = {Genetics Society of America},
volume = {161},
number = {3},
keywords = {},
pubstate = {published},
tppubtype = {article}
}
|
2000
|
| Gonzalez, J; Bertran, E; Ashburner, M; Ruiz, A Molecular organization of the Drosophila melanogaster Adh chromosomal region in D. repleta and D. buzzatii, two distantly related species of the Drosophila subgenus Journal Article In: Chromosome Research, vol. 8, no. 5, pp. 375-385, 2000. @article{RN18,
title = {Molecular organization of the Drosophila melanogaster Adh chromosomal region in D. repleta and D. buzzatii, two distantly related species of the Drosophila subgenus},
author = {J Gonzalez and E Bertran and M Ashburner and A Ruiz},
url = {https://www.ncbi.nlm.nih.gov/pubmed/10997778},
year = {2000},
date = {2000-01-01},
journal = {Chromosome Research},
volume = {8},
number = {5},
pages = {375-385},
keywords = {},
pubstate = {published},
tppubtype = {article}
}
|
